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Creators/Authors contains: "Feng, Shi"

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  1. Language models are optimized to learn which responses you prefer, but they don't learn why you preferred a particular response. This limits their ability to tailor to personalized requests (e.g., "What should I eat for dinner? I'm vegetarian"), so we introduce a simple fix: have models infer personas that explain why users could prefer responses. We show training on these inferred personas leads to responses that are significantly more personalized for user needs. 
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  2. Despite the large body of literature on avian migratory behavior, there is little information about stopover sites during bird movement, including the population-level drivers of breeding grounds and wintering grounds. Stopovers play an essential role in bird migratory site chains for energy supply and rest. There is an urgent need to detect and protect stopover sites to secure the long-term sustainability of migratory network connectivity and robustness. To address this challenge, we reconstructed a migration network and identified geographic hotspots denoted as stopover sites by analyzing the high-density population movements of 52 focal migratory bird species with observation data from eBird through PageRank algorithm. Furthermore, potential alternative stopover sites were explored using a word embedding technique based on geo-functional similarity. Our study was conducted in North and Central America during a three-year period and revealed three key areas, including Florida peninsula and its inland, the region of Central America, and the region near Puget Sound. Results from this study can be used for conservation prioritization guidance. 
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  3. Language models like ChatGPT are pretty good at answering questions (e.g. "What is 12 * 12?"), but we show they can surprisingly struggle when asked to do the reverse task: generating questions for answers (e.g. "Give me a question with the answer 144"). We study when these errors happen, what might be causing them, and how they can be addressed. 
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  4. Abstract With rapid progress in simulation of strongly interacting quantum Hamiltonians, the challenge in characterizing unknown phases becomes a bottleneck for scientific progress. We demonstrate that a Quantum-Classical hybrid approach (QuCl) of mining sampled projective snapshots with interpretable classical machine learning can unveil signatures of seemingly featureless quantum states. The Kitaev-Heisenberg model on a honeycomb lattice under external magnetic field presents an ideal system to test QuCl, where simulations have found an intermediate gapless phase (IGP) sandwiched between known phases, launching a debate over its elusive nature. We use the correlator convolutional neural network, trained on labeled projective snapshots, in conjunction with regularization path analysis to identify signatures of phases. We show that QuCl reproduces known features of established phases. Significantly, we also identify a signature of the IGP in the spin channel perpendicular to the field direction, which we interpret as a signature of Friedel oscillations of gapless spinons forming a Fermi surface. Our predictions can guide future experimental searches for spin liquids. 
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  5. Abstract The glutaminase enzymes GAC and GLS2 catalyze the hydrolysis of glutamine to glutamate, satisfying the ‘glutamine addiction’ of cancer cells. They are the targets of anti-cancer drugs; however, their mechanisms of activation and catalytic activity have been unclear. Here we demonstrate that the ability of GAC and GLS2 to form filaments is directly coupled to their catalytic activity and present their cryo-EM structures which provide a view of the conformational states essential for catalysis. Filament formation guides an ‘activation loop’ to assume a specific conformation that works together with a ‘lid’ to close over the active site and position glutamine for nucleophilic attack by an essential serine. Our findings highlight how ankyrin repeats on GLS2 regulate enzymatic activity, while allosteric activators stabilize, and clinically relevant inhibitors block, filament formation that enables glutaminases to catalyze glutaminolysis and support cancer progression. 
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